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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6006462 chr22:44344776 A/C LRRC37A3 chr17:62850430-62915598:- 0.46 6.17 1.49E-9 Box Plot
THCA rs6006462 chr22:44344776 A/C LZTR1 chr22:21333751-21353327:+ -0.7 -8.37 6.34E-16 Box Plot
THCA rs6006462 chr22:44344776 A/C MAPK1 chr22:22108789-22221970:- -0.6 -9.25 7.42E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C MED15 chr22:20850200-20941919:+ -0.38 -5.92 6.26E-9 Box Plot
THCA rs6006462 chr22:44344776 A/C MICALL1 chr22:38301664-38338829:+ -0.47 -5.89 7.1E-9 Box Plot
THCA rs6006462 chr22:44344776 A/C MKL1 chr22:40806285-41032706:- -0.67 -8.23 1.83E-15 Box Plot
THCA rs6006462 chr22:44344776 A/C MORC2 chr22:31321117-31364284:- -0.65 -6.89 1.77E-11 Box Plot
THCA rs6006462 chr22:44344776 A/C MPST chr22:37415676-37425863:+ -0.52 -7 8.66E-12 Box Plot
THCA rs6006462 chr22:44344776 A/C MTMR3 chr22:30279144-30426855:+ -0.69 -8.69 5.66E-17 Box Plot
THCA rs6006462 chr22:44344776 A/C MTP18 chr22:30805176-30825041:+ -0.75 -9.24 7.89E-19 Box Plot
THCA rs6006462 chr22:44344776 A/C NAGA chr22:42454358-42466846:- -0.69 -7.41 5.76E-13 Box Plot
THCA rs6006462 chr22:44344776 A/C NCAPD3 chr11:134020014-134095348:- 0.45 6.3 6.75E-10 Box Plot
THCA rs6006462 chr22:44344776 A/C NCAPH2 chr22:50946645-50961901:+ -0.76 -9.51 9.27E-20 Box Plot
THCA rs6006462 chr22:44344776 A/C NDUFA6 chr22:42481529-42486959:- -0.77 -10.39 6.23E-23 Box Plot
THCA rs6006462 chr22:44344776 A/C NF2 chr22:29999545-30094587:+ -0.7 -8.03 7.58E-15 Box Plot